1. Tanaka Y., Isomura T., Shimba K., Kotani K., Jimbo Y.
    Neurogenesis enhances response specificity to spatial pattern stimulation in hippocampal cultures
    IEEE Trans. Biomed. Eng., doi: 10.1109/TBME.2016.2639468, in press, 2017


  1. Shimba K., Iida S., Kotani K., Jimbo Y.
    Cell-cycle-dependent Ca2+ transients in human induced pluripotent stem cells revealed by a simultaneous imaging of cell nuclei and intracellular Ca2+ level
    Integr. Biol., Vol. 8, pp. 985-990, 2016
  2. Isomura T, Sakai K., Kotani K., Jimbo Y.
    Linking neuromodulated spike-timing dependent plasticity with the free-energy principle
    Neural comput., DOI: 10.1162/NECO_a_00862
  3. Oiwa K., Shimba K., Numata T., Takeuchi A., Kotani K., Jimbo Y.
    A device for co-culturing autonomic neurons and cardiomyocytes using micro-fabrication techniques
    Intrgr. Biol.,  Vol. 8, pp. 341-348, 2016
  4. Shimba K., Sakai K., Kotani K., Jimbo Y.
    Experimental evaluation of activity-dependent changes in axonal conduction delay using a microtunnel device
    NOLTA, Vol. 7, pp. 76-85, 2016


  1. Yoshida L., Kotani K., Jimbo Y.
    Device Fabrication for Creating Multiscale Miniature Neuronal Networks and Spatiotemporal Pattern Analysis of Spontaneous Electrical Activities
    Electron. Comm. Jpn., 98, 2, pp. 43-51, 2015
  2. Shimba K., Sakai K., Takayama Y., Kotani K., Jimbo Y.
    Recording axonal conduction to evaluation the integration of pluripotent cell-derived neurons into a neuronal network
    Biomed. Microdevices, Vol. 17, Article 94, 2015
  3. Isomura T., Kotani K., Jimbo Y.
    Cultured Cortical Neurons Can Perform Blind Source Separation According to the Free-Energy Principle
    PLoS Comput. Biol., Vol. 11, e1004643, 2015
  4. Naito G., Yoshida L., Numata T., Ogawa Y., Kotani K., Jimbo Y.
    Simultaneous Classification of Multiple Motor Imagery and P300 for Increase in Output Information of Brain-Computer Interface
    Electr. Eng. Jpn., Vol. 98,  pp. 47-54, 2015
  5. Isomura T., Shimba K., Takayama Y., Takeuchi A., Kotani K., Jimbo Y.
    Signal transfer within a cultured asymmetric cortical neuron circuit
    J. Neural. Eng., Vol. 12, 066023, 2015
  6. Shimba K., Sakai K., Isomura T., Kotani K., Jimbo Y.
    Axonal conduction slowing induced by spontaneous bursting activity in cortical neurons cultured in a microtunnel device
    Integr. Biol., Vol. 7, pp. 64-72, 2015
  7. Isomura T., Ogawa Y., Kotani K., Jimbo Y.
    Accurate connection strength estimation based on variational Bayes for detecting synaptic plasticity
    Neural. comput., Vol. 27, pp. 819-844, 2015
  8. Numata T., Ogawa Y., Kotani K., Jimbo Y.
    Extraction of response waveforms of heartbeat and blood pressure to swallowing using mixed time domain and respiratory-phase domain analysis
    Method.  Inform. Med., Vol. 23, pp. 179-188, 2015
  9. Saito A., Nakashima Y., Shimba K., Takayama Y., Kotani K., Jimbo Y.
    Modulation of neuronal network activity using magnetic nanoparticle- based astrocytic network integration
    Biomater. Sci., Vol. 8, pp. 1228-1235, 2015


  1. Kotani K., Yamaguchi I., Yoshida L., Jimbo Y., Ermentrout G. B.
    Population dynamics of the modified theta model: macroscopic phase reduction and bifurcation analysis link microscopic neuronal interactions to macroscopic gamma oscillation
    J. Roy. Soc. Interface, Vol. 11, 2014
  2. Ogawa Y., Kotani K., Jimbo Y.
    Relationship between working memory performance and neural activation measured using near-infrared spectroscopy
    Brain Behav., 4, pp. 544–551, 2014
  3. Isomura A., Takeuchi A., Shimba K., Kotani K., Jimbo Y.
    Connection-strength estimation of neuronal networks by fitting for Izhikevich model
    Electr. Eng. Jpn., 187, pp. 42-50, 2014
  4. Saito A., Takayama Y., Moriguchi H., Kotani K., Jimbo Y.
    Induced current-pharmacological split stimulation system for neuronal networks
    IEEE T. Bio-med. Eng., 61, pp. 463-472, 2014
  5. Shimba K., Saito A., Takeuchi A., Takayama Y., Kotani K., Jimbo Y.
    Neural transplantation model using integration co-culture chamber
    Electron. Comm. Jpn., 97, 2, pp. 36-43, 2014
  6. Ikuhiro Yamaguchi, Yutaro Ogawa, Hiroya Nakao, Yasuhiko Jimbo, Kiyoshi Kotani.
    Linear Analysis of the Corticothalamic Model with Time Delay
    Electron. Comm. Jpn., 97, 8, pp. 32-44, 2014


  1. Numata T., Ogawa Y., Yoshida L., Kotani K., Jimbo Y.
    High-accuracy extraction of respiratory sinus arrhythmia with statistical processing using normal distribution
    Electron. Comm. Jpn. 96, pp. 23-32, 2013
  2. Kotani K., Ogawa H., Ogata H., Numata T., Nakazawa K., Jimbo Y.
    Method for evaluation of fractal properties from data with noisy observational errors
    IEEJ T. Electr. Electr. 8, pp. 247-252, 2013
  3. Numata T., Kotani K., Jimbo Y.
    Effect of body motion to respiratory sinus arrhythmia with different timings of respiration
    International Journal of Bioelectromagnetism 15, pp. 47-53, 2013


  1. Takeuchi A., Shimba K., Mori M., Takayama Y., Moriguchi H., Kotani K., Lee J., Noshiro M., Jimbo Y.
    Sympathetic neurons modulate the beat rate of pluripotent cell-derived cardiomyocytes in vitro
    Integr. Biol. 4, pp. 1532-1539, 2012
  2. Ogawa Y., Takeno S., Kotani K., Jimbo Y.
    Analysis of EEG Phase Properties with Pulse and Noise Stimuli in Visual Cortex
    Electron. Commun. Jpn. 95, pp. 58-64, 2012
  3. Kotani K., Yamaguchi I., Ogawa Y., Jimbo Y., Nakao H., Ermentrout G. B.
    Adjoint Method Provides Phase Response Functions for Delay-Induced Oscillations
    Physical review letters 109, 044101, 2012
  4. Takayama Y., Moriguchi H., Kotani K., Suzuki T., Mabuchi K., Jimbo Y.
    Network-wide integration of stem cell-derived neurons and mouse cortical neurons using microfabricated co-culture devices
    Biosystems 107, pp. 1-8, 2012


  1. Yamaguchi I., Ogawa Y., Jimbo Y., Nakao H., Kotani K.
    Reduction theories elucidate the origins of complex biological rhythms generated by interacting delay-induced oscillations
    PLoS ONE 6, e26497, 2011
  2. Takayama Y., Saito A., Moriguchi H., Kotani K., Suzuki T., Mabuchi K., Jimbo Y.
    Simultaneous induction of calcium transients in embryoid bodies using microfabricated electrode substrates
    J. Biosci. Bioeng. 112, pp. 624-629, 2011
  3. Takeuchi A., Moriguchi H., Kotani K., Miwa K., Lee J., Noshiro M., Jimbo Y.
    Development of Spatially-Separated Co-culture System of the Sympathetic Neuron and the Cardiomyocyte
    IEEJ T. Electr. Electr. 6, pp. 151-156, 2011
  4. Saito A., Takayama Y., Moriguchi H., Kotani K., Jimbo Y.
    Effects of Extremely Low Frequency Magnetic Fields on Neuronal Development of P19 Embryonal Carcinoma Cells
    IEEJ Trans. 6, pp. 157-162, 2011
  5. Suzurikawa J., Kanzaki R., Nakao M., Jimbo Y., Takahashi H.
    Optimization of Thin-Film Configuration for Light-Addressable Stimulation Electrode Holdings
    Electron. Commun. Jpn. 94, pp. 61-68, 2011


  1. Tonomura W., Moriguchi H., Jimbo Y., Konishi S.
    Parallel multipoint recording of aligned and cultured neurons on micro channel array toward cellular network analysis
    Biomed. Microdevices 12, pp. 737-743, 2010
  2. Hattori S., Suzurikawa J., Kanzaki R., Jimbo Y., Hamaguchi T., Takahashi H., Nakao M.
    Direction Control of Information Transfer between Neuronal Populations with Asymmetric Three-Dimensional Microstructure
    Electron. Commun. Jpn. 93, pp. 17-25, 2010
  3. Matsuda Y, Sakuma I, Jimbo Y, Kobayashi E, Arafune T, Isomura T
    Emotion recognition of finger BRAILLE
    Int. J. Innov. Comp. Info. Control 6, pp. 1363-1377, 2010


  1. Takayama Y., Moriguchi H., Kotani K., Jimbo. Y.
    Spontaneous calcium oscillations in cultured cortical networks during development
    IEEE Trans. BME 56, pp. 2649-2956, 2009
  2. Takayama Y, Saito A., Moriguchi H., Jimbo. Y.
    Ensemble Stimulation of Embryoid Bodies using Substrate-Embedded Electrodes
    IEEJ Trans. 4, pp. 734-735, 2009


  1. Kotani K., Takamasu K., Jimbo Y, Yamamoto Y.
    Postural-induced phase shift of respiratory sinus arrhythmia and blood pressure variations – insight from respiratory-phase domain analysis
    Am. J.Physiol. 294, pp. H1481-H1489, 2008


  1. Jimbo Y.
    MEA-based recording of neuronal activity in vitro
    Arch. Ital. Biol. 145, pp. 289-297, 2007